Input parameters:
Query = ENSP00000424327 (Len=151)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000424327, Len=151):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLEL 80
WD40-rpts (___________WD 1___________)___________________WD 2__________________) (______
Query 81 NGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKVGSTHRRITRMGYS 151
WD40-rpts ______________WD 3____________________)
3 WD40-repeats found in QUERY=ENSP00000424327 (Len=151):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-28 3.43 256.28 0.02169 10.0% 33.08
WD 2: Seg 4 28-70 7.05 406.07 0.00021 27.5% 53.07
WD 3: Seg 8 74-119 8.77 476.74 2.3e-05 37.5% 56.11
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-28 ----------------MLRWLIGGGR-------EPQGLAEKSPLQTIGEEQ
WD 2 28-70 QTQNPYTELLVLKAHHDIVRFL-VQL-------DDYRFASAGDDGIVVVWN
WD 3 74-119 -GE----KLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWD
WD40 Template TGE----CLRTLSGHTSGVTSVSFSP-------DGKRLVSGSEDGTIKVWD