Input parameters:
Query = ENSP00000424319 (Len=100)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000424319, Len=100):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKRIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGADYIVKIFDRHGQKRSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIY 80
WD40-rpts (__________________WD 1__________________)(__________________WD 2_______________
Query 81 LWDANTNKTSQLDNGMRKTY 100
WD40-rpts __)
2 WD40-repeats found in QUERY=ENSP00000424319 (Len=100):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-42 6.52 383.89 0.00042 15.0% 45.89
WD 2: Seg 5 43-83 5.80 354.18 0.00105 20.0% 49.04
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-42 MKRIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGA-DYIVKIFD
WD 2 43-83 RHGQ--KRSEINLPGNCVAMDWDKDGDVLAVIAEKSSCIYLWD
WD40 Template TGEC--LRTLSGHTSGVTSVSFSPDGKRLVSGSE-DGTIKVWD