Input parameters:
Query = ENSP00000424144 (Len=89)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000424144, Len=89):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP 80
WD40-rpts (_________________WD 1________________) (____________WD 2____
Query 81 TQPFILTSS 89
WD40-rpts ________)
2 WD40-repeats found in QUERY=ENSP00000424144 (Len=89):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 18-56 8.40 461.78 3.7e-05 20.0% 54.94
WD 2: Seg 6 60-89 2.98 237.74 0.03825 10.0% 39.68
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 18-56 QTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFN
WD 2 60-89 LERVHMFEAHSDYIRCIAVHPTQPFILTSS---------
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD