Input parameters:
Query = ENSP00000423921 (Len=99)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000423921, Len=99):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGTMMLYNVSPTILLLINWHLVPPVTLGCG 80
WD40-rpts (__________WD 1__________) (_________________WD 2________________)
Query 81 LLNRSLSPNTNQAARSSAA 99
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000423921 (Len=99):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-26 3.54 260.89 0.01882 17.5% 39.73
WD 2: Seg 4 30-68 9.30 498.74 1.2e-05 22.5% 56.83
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-26 ------------XINDIAFKPDGTQLILAAGS-RLLVYD
WD 2 30-68 GTLLQPLKGHKDTVYCVAYAKDGTMMLYNVSPTILLLIN
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD