Input parameters:
Query = ENSP00000423271 (Len=153)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000423271, Len=153):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQ 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2____________
Query 81 IRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGS 153
WD40-rpts ____) (_________________WD 3_________________)
3 WD40-repeats found in QUERY=ENSP00000423271 (Len=153):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-43 9.43 504.12 1.0e-05 22.5% 56.53
WD 2: Seg 5 47-85 8.80 478.10 2.2e-05 20.0% 55.59
WD 3: Seg 11 111-150 8.37 460.24 3.9e-05 40.0% 57.94
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-43 RLDIKRKLTARSDRVKSVDLHP-TEPWMLASLYNGSVCVWN
WD 2 47-85 -QTLVKTFEVCDLPVRAAKFVA-RKNWVVTGADDMQIRVFN
WD 3 111-150 -QPFILTSSGHTHYVMQIVINPKDNNQFASASLDRTIKVWQ
WD40 Template TGECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD