Input parameters:
Query = ENSP00000423220 (Len=182)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000423220, Len=182):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XIKLRRSKAGNRREDLSSKVTLEKVLGITVSGGRGLACDPRSGLVAYPAGCVVVLFNPRKHKQHHILNSSRKTITALAFS 80
WD40-rpts (_________________WD
Query 81 PDGKYLVTGEVWDGSLKCAFVTSSQRVLILLVKEACFGNHCLNYSLPPGAPCWAQEERFCPGGVVLLGAEIDLSGSGSQC 160
WD40-rpts 1_________________)
Query 161 RLPIRTIQGALNNLKYRRPPRD 182
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000423220 (Len=182):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 61-100 5.50 341.93 0.00153 35.0% 51.67
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 61-100 HKQHHILNSSRKTITALAFSPDGKYLVTGEVWDGSLKCAF
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGS-EDGTIKVWD