Input parameters:
Query = ENSP00000422922 (Len=150)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422922, Len=150):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MHEANCSSPGETGEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLELNGH 80
WD40-rpts (____________________WD 1___________________) (_________
Query 81 TQKITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKCLTVLQRLDVWLSGGN 150
WD40-rpts ___________WD 2____________________) (_____________WD 3____________)
3 WD40-repeats found in QUERY=ENSP00000422922 (Len=150):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 23-67 7.26 414.62 0.00016 27.5% 52.25
WD 2: Seg 7 71-116 8.66 472.54 2.7e-05 37.5% 55.47
WD 3: Seg 10 120-150 3.06 241.15 0.03447 12.5% 39.45
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 23-67 EEQTQNPYTELLVLKAHHDIVRFL-VQLD-------DYRFASAGDDGIVVVWN
WD 2 71-116 -GE------KLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWD
WD 3 120-150 -TR------QVQRISCFQSTVKCLTVLQR-------LDVWLSGG--------N
WD40 Template TGE------CLRTLSGHTSGVTSVSFSPD-------GKRLVSGSEDGTIKVWD