Input parameters:
Query = ENSP00000422624 (Len=113)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422624, Len=113):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 GDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLTF 80
WD40-rpts (___________________WD 1__________________)(______________________WD 2_
Query 81 NPTTEILAIASEKMKEAVRLACCLNRTEAILGF 113
WD40-rpts _____________________)
2 WD40-repeats found in QUERY=ENSP00000422624 (Len=113):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 10-52 7.53 425.64 0.00011 17.5% 56.77
WD 2: Seg 6 53-102 7.05 406.05 0.00021 25.0% 53.06
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 10-52 VNSRKCL--------NRFVDEGSLYGLSIATSRNGQYVACGSN--CGVVNIYN
WD 2 53-102 QDS---CLQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLAC
WD40 Template TGE---C--------LRTLSGHTSGVTSVSFSPDGKRLVSGSE--DGTIKVWD