Input parameters:
Query = ENSP00000422547 (Len=111)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422547, Len=111):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP 80
WD40-rpts (_________________WD 1________________) (_________________WD
Query 81 TQPFILTSSDDMLIKLWDWDKKWSCSQVFEG 111
WD40-rpts 2________________)
2 WD40-repeats found in QUERY=ENSP00000422547 (Len=111):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 18-56 8.57 468.60 3.0e-05 20.0% 56.39
WD 2: Seg 7 60-98 9.23 495.89 1.3e-05 22.5% 53.46
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 18-56 QTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFN
WD 2 60-98 LERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWD
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD