Input parameters:
Query = ENSP00000422510 (Len=179)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422510, Len=179):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLRWLIGGGREPQGLAETIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLELNGHTQ 80
WD40-rpts (________________WD 1________________) (___________
Query 81 KITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKCLTVLQRLDVWLSGGNDLCVWNRKLDLL 160
WD40-rpts _________WD 2____________________) (________________WD 3_______________)
Query 161 CKTSHLSDTGISALVEIPK 179
WD40-rpts
3 WD40-repeats found in QUERY=ENSP00000422510 (Len=179):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 28-65 7.46 422.77 0.00012 27.5% 50.36
WD 2: Seg 7 69-114 8.69 473.80 2.6e-05 37.5% 55.86
WD 3: Seg 11 118-154 7.04 405.28 0.00021 20.0% 50.42
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 28-65 YTELLVLKAHHDIVRFL-VQLD-------DYRFASAGDDGIVVVWN
WD 2 69-114 GEKLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWD
WD 3 118-154 TRQVQRISCFQSTVKCLTVLQR-------LDVWLSGGND--LCVWN
WD40 Template GECLRTLSGHTSGVTSVSFSPD-------GKRLVSGSEDGTIKVWD