Input parameters:

  Query = ENSP00000422374 (Len=430)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000422374, Len=430):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKRDTADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKW 80  
WD40-rpts      (_______________WD 1______________)                      (____________________WD

Query       81 LPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHIN 160 
WD40-rpts       2___________________)        (________________WD 3_______________)(____________

Query      161 SISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAAL 240 
WD40-rpts      ___WD 4_______________)            (_________________WD 5________________)      

Query      241 CDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYENDC 320 
WD40-rpts                   (________________WD 6________________)              (______________

Query      321 IFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILH 400 
WD40-rpts      _____WD 7___________________)  (_________________WD 8________________)          

Query      401 TAWHPAENIIAIAATNNLYIFQDKVNSDMH 430 
WD40-rpts                                    

8 WD40-repeats found in QUERY=ENSP00000422374 (Len=430):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-35       7.14  409.47  0.00019       15.0%     40.90
  WD 2:  Seg  5    58-102      4.67  307.42  0.00447       17.5%     42.75
  WD 3:  Seg 10   111-147      5.17  328.16  0.00235       15.0%     15.73
  WD 4:  Seg 12   148-183      6.06  365.03  0.00075       25.0%     46.22
  WD 5:  Seg 17   196-234      5.98  361.67  0.00083       20.0%     39.06
  WD 6:  Seg 20   254-291      6.31  375.51  0.00054       30.0%     40.89
  WD 7:  Seg 24   306-349      5.36  336.11  0.00184        7.5%     44.08
  WD 8:  Seg 28   352-390      5.34  335.13  0.00189       12.5%     20.81

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-35     -----MGK---RDTAD----IISTVEFNH--TGELLATGDKGGRVVIFQ
   WD 2   58-102    SHEPEFDYLKSLEIEE----KINKIKWLPQQNAAHSLLSTNDKTIKLWK
   WD 3  111-147    EGY---NL---KDEEG----KLKDLSTVT--SLQVPVLKPMDLMVEVSP
   WD 4  148-183    ---RRIFA---NGHTY----HINSISVNS--DCETYMS-ADDLRINLWH
   WD 5  196-234    IKP--ANM---EDLTE----VITASEFHP-HHCNLFVYSSSKGSLRLCD
   WD 6  254-291    -PSNRSFF---SEIIS----SVSDVKFSH--SGRYMLTRD-YLTVKVWD
   WD 7  306-349    DYLRSKLC---SLYENDCIFDKFECAWNG--SDSVIMTGAYNNFFRMFD
   WD 8  352-390    -TKRDVTL---EASRE----SSKPRAVLK--PRRVCVGGKRRRDDISVD

   WD40 Template    TGECLRTL---SGHTS----GVTSVSFSP--DGKRLVSGSEDGTIKVWD