Input parameters:
Query = ENSP00000422295 (Len=877)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422295, Len=877):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP 80
WD40-rpts (_________________WD 1________________) (_________________WD
Query 81 TQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVN 160
WD40-rpts 2________________)(___________________WD 3___________________)(_________________
Query 161 CIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNY 240
WD40-rpts __WD 4___________________) (_________________WD 5________________) (________
Query 241 GMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMG 320
WD40-rpts _________WD 6________________)
Query 321 SCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKEKKSFKPDFG 400
WD40-rpts (__________________WD 7__________________)
Query 401 AESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDG 480
WD40-rpts
Query 481 IEDAFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIISYSLLV 560
WD40-rpts (_________________WD 8________________)
Query 561 SVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQK 640
WD40-rpts
Query 641 WKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTG 720
WD40-rpts
Query 721 RLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTP 800
WD40-rpts
Query 801 NEERNVMEEGKDFQPSRSTAQQELDGKPASPTPVIVASHTANKEEKSLLELEVDLDNLELEDIDTTDINLDEDILDD 877
WD40-rpts
8 WD40-repeats found in QUERY=ENSP00000422295 (Len=877):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 18-56 6.53 384.27 0.00041 20.0% 55.86
WD 2: Seg 7 60-98 7.84 438.56 7.6e-05 22.5% 53.76
WD 3: Seg 11 99-142 7.69 432.12 9.3e-05 37.5% 54.58
WD 4: Seg 15 143-186 7.98 444.28 6.4e-05 37.5% 50.37
WD 5: Seg 19 190-228 9.53 508.43 8.7e-06 40.0% 54.75
WD 6: Seg 23 232-270 4.61 305.06 0.00481 20.0% 53.50
WD 7: Seg 34 346-387 3.77 270.40 0.01405 5.0% 41.12
WD 8: Seg 49 519-557 3.58 262.47 0.01793 20.0% 53.71
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 18-56 -Q--T---LVKTFEVCDLPVRAAKFVA-RKNW--VVTGADDMQIRVFN
WD 2 60-98 -L--E---RVHMFEAHSDYIRCIAVHP-TQPF--ILTSSDDMLIKLWD
WD 3 99-142 WD--KKWSCSQVFEGHTHYVMQIVINPKDNNQ--FASASLDRTIKVWQ
WD 4 143-186 LGSSS---PNFTLEGHEKGVNCIDYYS-GGDKPYLISGADDRLVKIWD
WD 5 190-228 -K--T---CVQTLEGHAQNVSCASFHP-ELPI--IITGSEDGTVRIWH
WD 6 232-270 -Y--R---LESTLNYGMERVWCVASLR-GSNN--VALGYDEGSIIVKL
WD 7 346-387 YIIYT---AMALRNKSFGSAQEFAWAH-DSSE--YAIRESNSIVKIFK
WD 8 519-557 GG--E----IVTIAHLDRTMYLLGYIP-KDNR--LYLGDKELNIISYS
WD40 Template TG--E---CLRTLSGHTSGVTSVSFSP-DGKR--LVSGSEDGTIKVWD