Input parameters:
Query = ENSP00000422237 (Len=97)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422237, Len=97):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYF 80
WD40-rpts (______________________WD 1_____________________) (________________WD
Query 81 TKGEYILLGGSDKQVSL 97
WD40-rpts 2_______________)
2 WD40-repeats found in QUERY=ENSP00000422237 (Len=97):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 10-58 4.76 311.41 0.00395 12.5% 44.96
WD 2: Seg 5 61-97 3.95 277.93 0.01114 12.5% 28.24
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 10-58 NKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQ
WD 2 61-97 -GK-----QIGKDRALNFDPCCISYFTKGEY----ILLGGSDKQVSL--
WD40 Template TGE-----CLRTLSGHTSGVTSVSFSPDGKR----LVSGSEDGTIKVWD