Input parameters:
Query = ENSP00000422198 (Len=116)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422198, Len=116):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
WD40-rpts (__________________WD 1_________________) (_________________WD 2______
Query 81 GSWDGTLRLWDLTTQGHHHEAICGPYQGCAECGLLL 116
WD40-rpts __________)
2 WD40-repeats found in QUERY=ENSP00000422198 (Len=116):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-44 8.78 477.44 2.3e-05 32.5% 54.36
WD 2: Seg 5 53-91 10.04 529.43 4.5e-06 45.0% 54.64
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-44 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWK
WD 2 53-91 -GIPQRALRGHSHFVSDVVISSD-GQFALSGSWDGTLRLWD
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD