Input parameters:
Query = ENSP00000422179 (Len=1118)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422179, Len=1118):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDVLCIEGLWSPEQKSVS 80
WD40-rpts (_______________WD 1______________) (______
Query 81 KHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFY 160
WD40-rpts ___________WD 2_________________)(_____________________WD 3_____________________
Query 161 QLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQAKPDSNYVVVGCQDGTIS 240
WD40-rpts ) (_________________WD 4________________) (_________________WD 5______________
Query 241 FYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIYELYSEDLSDMHYRV 320
WD40-rpts __)
Query 321 KEKIIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNLF 400
WD40-rpts (___
Query 401 AIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVH 480
WD40-rpts ______________WD 6_________________)_________________WD 7________________)
Query 481 RQKLQGFVVGYNGSKIFCLHVFSISAVEVPQSAPMYQYLDRKLFKEAYQIACLGVTDTDWRELAMEALEGLDFETAKKER 560
WD40-rpts
Query 561 KKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEP 640
WD40-rpts
Query 641 KAAVEMYISAGEHVKAIEICGDHGWVDMLIDIARKLDKAEREPLLLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVET 720
WD40-rpts
Query 721 QRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKAGRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQ 800
WD40-rpts
Query 801 CLDIAQADPAQKDTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLA 880
WD40-rpts
Query 881 KQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIF 960
WD40-rpts
Query 961 SASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPKRDDRQLEIANNSSQILRLVETKDSIGDEDPFTAKLSFEQGGSEF 1040
WD40-rpts
Query 1041 VPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMCPSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP 1118
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000422179 (Len=1118):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 6-40 4.67 307.59 0.00445 15.0% 43.73
WD 2: Seg 7 74-113 6.39 378.63 0.00049 20.0% 54.84
WD 3: Seg 11 114-161 3.46 257.54 0.02087 12.5% 48.95
WD 4: Seg 15 164-202 5.17 328.25 0.00234 12.5% 54.71
WD 5: Seg 19 205-243 6.91 399.91 0.00025 32.5% 57.12
WD 6: Seg 39 397-436 6.37 377.73 0.00051 22.5% 56.62
WD 7: Seg 42 436-474 2.83 231.56 0.04615 12.5% 34.53
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 6-40 T---------WRDKAEHCINDIAFKPDGTQ----LILAAGSRLLVYDT
WD 2 74-113 PE----QKSVSKHKSSSKIICCSWTNDGQY----LALGMFNGIISIRN
WD 3 114-161 KNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQ
WD 4 164-202 -G----KQIGKDRALNFDPCCISYFTKGEY----ILLGGSDKQVSLFT
WD 5 205-243 -G----VRLGTVGEQNSWVWTCQAKPDSNY----VVVGCQDGTISFYQ
WD 6 397-436 DN----LFAIVLLKQATAVRCLDMSASRKK----LAVVDENDTCLVYD
WD 7 436-474 -D----IDTKELLFQEPNANSVAWNTQCED----MLCFSGGGYLNIKA
WD40 Template TG----ECLRTLSGHTSGVTSVSFSPDGKR----LVSGSEDGTIKVWD