Input parameters:
Query = ENSP00000422132 (Len=156)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000422132, Len=156):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAVEGSTITSRIKNLLRSPSIKLRRSKAGNRREDLSSKVTLEKVLGITVSGGRGLACDPRSGLVAYPAGCVVVLFNPRKH 80
WD40-rpts (________________WD 1_______________)________________WD 2__________________) (
Query 81 KQHHILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWDVAEHSQVAELQEHKYGVACVAFSPSAKYIVSVGYQH 156
WD40-rpts __________________WD 3_________________) (______________WD 4_____________)
4 WD40-repeats found in QUERY=ENSP00000422132 (Len=156):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-37 6.33 376.09 0.00053 17.5% 34.42
WD 2: Seg 4 35-76 5.90 358.41 0.00092 10.0% 45.66
WD 3: Seg 8 80-120 8.72 474.91 2.5e-05 35.0% 56.99
WD 4: Seg 11 124-156 4.95 318.93 0.00313 27.5% 42.20
Multiple sequence alignment of 4 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-37 ---MA---VEGSTITSRIKNLLRSPSIKLRRSKAGN--RREDLSS
WD 2 35-76 LSSKVTLEKVLGITVSGGRGLACDPRSGLVAYPA-G--CVVVLFN
WD 3 80-120 -HKQH---HILNSSRKTITALAFSPDGKYLVTGESGHMPAVRVWD
WD 4 124-156 -HSQV---AELQEHKYGVACVAFSPSAKYIVSVGYQ--------H
WD40 Template TGECL---RTLSGHTSGVTSVSFSPDGKRLVSGSED--GTIKVWD