Input parameters:
Query = ENSP00000421953 (Len=80)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000421953, Len=80):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGNESSSVACLGHAAGQ 80
WD40-rpts (_________________WD 1________________) (________________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000421953 (Len=80):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-39 7.78 436.21 8.2e-05 20.0% 55.74
WD 2: Seg 4 43-80 5.53 342.90 0.00149 27.5% 40.50
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-39 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGS-RLLVYD
WD 2 43-80 -GTLLQPLKGHKDTVYCVAYAKDGNESSSVACLGHAA-GQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD