Input parameters:
Query = ENSP00000421595 (Len=132)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000421595, Len=132):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 YKFPKNVNWEYKTDTDLYEFAKCKAYPTSVCFSPDGKKIATIGSDRKVRIFRFVTGKLMRVFDESLSMFTELQQMRQQLP 80
WD40-rpts (____________________WD 1___________________) (________________________
Query 81 DMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRG 132
WD40-rpts _________WD 2________________________________)
2 WD40-repeats found in QUERY=ENSP00000421595 (Len=132):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 8-52 6.78 394.91 0.00030 27.5% 44.04
WD 2: Seg 5 56-126 3.67 266.46 0.01586 22.5% 42.09
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 8-52 NWEYKTDTDLYEFAKC---------------------------------KAYPTSVCFSPDGKKIATIGSDRKVRIFR
WD 2 56-126 -GKLMRVFDE-----SLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLG-IKVIN
WD40 Template TGECLRTLSG-----H---------------------------------TSGVTSVSFSPDGKRLVSGSEDGTIKVWD