Input parameters:
Query = ENSP00000421399 (Len=115)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000421399, Len=115):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 DVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLTFNPTTEILA 80
WD40-rpts (__________________WD 1_________________)(______________________WD 2_________
Query 81 IASEKMKEAVRLVAPLLRLLKRLFEVQLSHKRSLS 115
WD40-rpts _____________)
2 WD40-repeats found in QUERY=ENSP00000421399 (Len=115):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-44 7.12 408.59 0.00019 22.5% 53.97
WD 2: Seg 5 45-94 6.48 382.17 0.00044 25.0% 47.81
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-44 SRKC--------LNRFVDEGSLYGLSIATSRNGQYVACGSN--CGVVNIYN
WD 2 45-94 QDSCLQETNPKPIKAIMNLVT-GVTSLTFNPTTEILAIASEKMKEAVRLVA
WD40 Template TGEC--------LRTLSGHTS-GVTSVSFSPDGKRLVSGSE--DGTIKVWD