Input parameters:
Query = ENSP00000420779 (Len=74)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000420779, Len=74):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFK 74
WD40-rpts (________WD 1_______)(_________________WD 2_________________)
2 WD40-repeats found in QUERY=ENSP00000420779 (Len=74):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-21 3.36 253.40 0.02370 25.0% 24.07
WD 2: Seg 3 22-61 8.14 450.92 5.2e-05 22.5% 48.30
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-21 -------------------MSPVDDTFISGSLDKTIRLWD
WD 2 22-61 LRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYD
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD