Input parameters:

  Query = ENSP00000420666 (Len=1026)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000420666, Len=1026):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKKFNFRKVLDGLTASSPGSGSSSGSNSGGGAGSGSVHPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQPTALAFDP 80  
WD40-rpts                                                                     (_______________W

Query       81 VQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLINEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITY 160 
WD40-rpts      D 1______________)  (_________________WD 2________________)     (_______________

Query      161 CHLPFQSKWLYVGTERGNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS 240 
WD40-rpts      __WD 3________________)             (__________________WD 4_________________)  (

Query      241 KRAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTIPHGKSQREGRKSESCKPILKVEYKTCKNSE 320 
WD40-rpts      _________________WD 5________________)                                          

Query      321 PFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFE 400 
WD40-rpts                                                                                      

Query      401 NPYPMDIHESPVTCTAYFADCPPDLILVLYSIGVKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSIKFWDASA 480 
WD40-rpts                                            (_________________WD 6________________)   

Query      481 ITLQMLYKLKTSKVFEKQKVGEGKQTCEIVEEDPFAIQMIYWCPESRIFCVSGVSAYVIIYKFSRHEITTEIVSLEVRLQ 560 
WD40-rpts                       (____________________WD 7___________________)                  

Query      561 YDVEDIITPEPETSPPFPDLSAQLPSSRSLSGSTNTVASEGVTKDSIPCLNVKTRPVRMPPGYQAELVIQLVWVDGEPPQ 640 
WD40-rpts                                                                               (______

Query      641 QITSLAVSSAYGIVAFGNCNGLAVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADNFCMRGLSNFYPDLTK 720 
WD40-rpts      ________WD 8_____________)  (____________________WD 9___________________)       

Query      721 RIRTSYQSLTELNDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNRWGPGRPPFRKAQSAACMEIS 800 
WD40-rpts                                                                                      

Query      801 LPVTTEENRENSYNRSRSSSISSIDKDSKEAITALYFMDSFARKNDSTISPCLFVGTSLGMVLIISLNLPLADEQRFTEP 880 
WD40-rpts                                                                                      

Query      881 VMVLPSGTFLSLKGAVLTFSCMDRMGGLMQPPYEVWRDPNNIDENEKSWRRKVVMNSSSASQEIGDHQYTIICSEKQAKV 960 
WD40-rpts                                                                                      

Query      961 FSLPSQTCLYVHNITETSFILQANVVVMCSSACLACFCANGHIMIMRYLPSYKLSGNHNNTSKVQS 1026
WD40-rpts                                                                        

9 WD40-repeats found in QUERY=ENSP00000420666 (Len=1026):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    64-98       6.31  375.35  0.00054       25.0%     44.90
  WD 2:  Seg  6   101-139      7.22  412.72  0.00017       25.0%     56.42
  WD 3:  Seg 10   145-183      6.32  375.67  0.00054       20.0%     54.71
  WD 4:  Seg 15   197-237      7.64  430.18  9.9e-05       32.5%     48.54
  WD 5:  Seg 19   240-278      7.31  416.48  0.00015       15.0%     56.28
  WD 6:  Seg 35   439-477      6.14  368.30  0.00068       22.5%     29.06
  WD 7:  Seg 39   498-542      4.70  308.92  0.00427        2.5%     50.60
  WD 8:  Seg 45   634-666      3.07  241.35  0.03426       17.5%     39.36
  WD 9:  Seg 48   669-713      3.81  271.98  0.01338       10.0%      7.80

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   64-98     T----------V-----RHGFPHQPTALAFDP-VQKILAIGTRTGAIRILG
   WD 2  101-139    -G-----VDCYC-----QHESGAAVLQLQFLI-NEGALVSASSDDTLHLWN
   WD 3  145-183    -P-----AILHS-----LKFNRERITYCHLPF-QSKWLYVGTERGNTHIVN
   WD 4  197-237    NK-----AIELS-----TKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWD
   WD 5  240-278    -S-----KRAEL-----RVYYDEAIHSIDWHH-EGKQFMCSHSDGSLTLWN
   WD 6  439-477    QG-----YSNKE-----WP-ISGGAWNLGAQT-YPEIIITGHADGSIKFWD
   WD 7  498-542    QKVGEGKQTCEI-----VEEDPFAIQMIYWCP-ESRIFCVSGVSAYVIIYK
   WD 8  634-666    -----------V-----DGEPPQQITSLAVSS-AYGIVAFGNCNG-LAVVD
   WD 9  669-713    QK-----TVLLSMGTIDLYRSSDLYQRQPRSP-RKNKQFIADNFCMRGLSN

   WD40 Template    TG-----ECLRT-----LSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD