Input parameters:

  Query = ENSP00000420646 (Len=640)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000420646, Len=640):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLRSTLAQQGTPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVWDS 80  
WD40-rpts      (________________WD 1________________)  (_________________WD 2________________) 

Query       81 YGRPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFAH 160 
WD40-rpts       (________________WD 3________________)  (_________________WD 4________________)

Query      161 VVEQHWEWKNFQVTLTKRRAMQVRNVLNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPIIFDLKEGTVS 240 
WD40-rpts       (______________WD 5______________)(________________WD 6________________)       

Query      241 LILQAERHFLLVDGSSIYLYSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIRDKADEKIIFLFEASTGKPLGDGKFL 320 
WD40-rpts                                    (________________WD 7_______________)(____________

Query      321 SHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTMVHTLAWNDTCNILCGLQDTRFIVWYYPNT 400 
WD40-rpts      _________WD 8_____________________)   (________________WD 9________________)    

Query      401 VYVDRDILPKTLYERDASEFSKNPHIVSFVGNQVTIRRADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKEQTMW 480 
WD40-rpts                                                                                      

Query      481 ACLAAMAVANRDMTTAEIAYAAIGEIDKVQYINSIKNLPSKESKMAHILLFSGNIQEAEIVLLQAGLVYQAIQININLYN 560 
WD40-rpts                                                                                      

Query      561 WERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLHYAEGLQIDWEKIKAKIEMEITKEREQSSSSQSSKSIGLKP 640 
WD40-rpts                                                                                      

9 WD40-repeats found in QUERY=ENSP00000420646 (Len=640):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-38       4.67  307.44  0.00447       20.0%     43.89
  WD 2:  Seg  4    41-79       8.30  457.34  4.3e-05       22.5%     53.78
  WD 3:  Seg  8    82-119      7.45  422.38  0.00013       32.5%     51.51
  WD 4:  Seg 12   122-160      7.51  425.03  0.00012       15.0%     55.99
  WD 5:  Seg 16   162-195      3.94  277.45  0.01130        5.0%     38.31
  WD 6:  Seg 19   196-233      5.34  335.34  0.00188       12.5%     45.55
  WD 7:  Seg 27   271-307      5.75  352.25  0.00111       12.5%     30.36
  WD 8:  Seg 30   308-355      4.88  316.13  0.00341        5.0%     48.57
  WD 9:  Seg 33   359-396      5.24  331.02  0.00215       12.5%     52.90

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-38     --MLR----STLAQQGTPVYSVAWGPDS----EKVLYTAGKQLIIKPL
   WD 2   41-79     -NAKV----LQWKAHDGIILKVDWNSVN----DLILSAGEDCKYKVWD
   WD 3   82-119    -GRPL----YNSQPHEHPITSVAWAPDG----ELFAVGSFH-TLRLCD
   WD 4  122-160    -GWSY----ALEKPNTGSIFNIAWSIDG----TQIAGACGNGHVVFAH
   WD 5  162-195    VEQ----------HWEWKNFQVTLTKRR----AMQVRNVLNDAVDLLE
   WD 6  196-233    FRD------RVIKASLNYAHLVVSTSLQ----CYVFSTKNWNTPIIFD
   WD 7  271-307    ---KF----PGMRTDILNAQTVSLSNDT----IAIRDKADEKIIFLFE
   WD 8  308-355    ASTGKPLGDGKFLSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITS
   WD 9  359-396    -FGKE----EQIIKLGTMVHTLAWNDTC----NILCGLQ-DTRFIVWY

   WD40 Template    TGECL----RTLSGHTSGVTSVSFSPDG----KRLVSGSEDGTIKVWD