Input parameters:

  Query = ENSP00000420537 (Len=560)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000420537, Len=560):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAPSTPLLTVRGSEGLYMVNGPPHFTESTVFPRVNIISVTNKGLLHSFDLLKAVCLEFSPKNTVLATWQPYTTSKDGTAG 80  
WD40-rpts                                            (______________________WD 1_______________

Query       81 IPNLQLYDVKTGTCLKSFIQKKMQNWCPSWSEDETLCARNVNNEVHFFENNNFNTIANKLHLQKINDFVLSPGPQPYKVA 160 
WD40-rpts      _______)   (________________WD 2________________)                               

Query      161 VYVPGSKGAPSFVRLYQYPNFAGPHAALANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGASYYGEQTLHYIATNGES 240 
WD40-rpts                                                                                   (__

Query      241 AVVQLPKNGPIYDVVWNSSSTEFCAVYGFMPAKATIFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWD 320 
WD40-rpts      ________________WD 3_________________)(__________________WD 4__________________)

Query      321 VKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGIFPAKT 400 
WD40-rpts      (_________________WD 5_________________)                                        

Query      401 ITYQAVPSEVPNEEPKVATAYRPPALRNKPITNSKLHEEEPPQNMKPQSGNDKPLSKTALKNQRKHEAKKAAKQEARSDK 480 
WD40-rpts                                                                                      

Query      481 SPDLAPTPAPQSTPRNTVSQSISGDPEIDKKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI 560 
WD40-rpts                                                                                      

5 WD40-repeats found in QUERY=ENSP00000420537 (Len=560):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    39-88       3.56  261.67  0.01838       15.0%     42.22
  WD 2:  Seg  8    92-129      3.16  245.22  0.03044       15.0%     47.87
  WD 3:  Seg 21   238-278      3.33  252.05  0.02469       12.5%     51.08
  WD 4:  Seg 25   279-320      3.94  277.35  0.01133       30.0%     39.59
  WD 5:  Seg 29   321-360      3.75  269.57  0.01441       15.0%     43.39

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   39-88     VTNKGLLHSFDLLKAVCLEFSPKNTVL--ATWQPYTTSKDGTAGIPNLQLYD
   WD 2   92-129    -GTCLKSFIQKKMQNWCPSWSEDETLC--AR----------NV-NNEVHFFE
   WD 3  238-278    -GESAVVQLPKNGPIYDVVWNSSSTEFCAVY----------GFMPAKATIFN
   WD 4  279-320    -LKCDPVFDFGTGPRNAAYYSPHGHIL--VL-------AGFGNLRGQMEVWD
   WD 5  321-360    VKNYKLISKPVASDSTYFAWCPDGEHI--LT----------ATCAPRLRVNN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRL--VS----------GSEDGTIKVWD