Input parameters:

  Query = ENSP00000420287 (Len=1000)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000420287, Len=1000):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKKFNFRKVLDGLTASSPGSGSSSGSNSGGGAGSGSVHPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQPTALAFDP 80  
WD40-rpts                                                                     (_______________W

Query       81 VQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLINEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITY 160 
WD40-rpts      D 1______________)  (_________________WD 2________________)     (_______________

Query      161 CHLPFQSKWLYVGTERGNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS 240 
WD40-rpts      __WD 3________________)             (__________________WD 4_________________)  (

Query      241 KRAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTIPHGKSQREGRKSESCKPILKVEYKTCKNSE 320 
WD40-rpts      _________________WD 5________________)                                          

Query      321 PFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFE 400 
WD40-rpts                                                                                      

Query      401 NPYPMDIHESPVTCTAYFADCPPDLILVLYSIGVKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSIKFWDASA 480 
WD40-rpts                                     (____________________WD 6____________________)   

Query      481 ITLQMLYKLKTSKVFEKQKVGEGKQTCEIVEEDPFAIQMIYWCPESRIFCVSGVSAYVIIYKFSRHEITTEIVSLEVRLQ 560 
WD40-rpts                         (___________________WD 7__________________)                  

Query      561 YDVEDIITPEPETSPPFPDLSAQLPSSRSLSGSTNTVASEGVTKDSIPCLNVKTRPVRMPPGYQAELVIQLVWVDGEPPQ 640 
WD40-rpts                                                                               (______

Query      641 QITSLAVSSAYGIVAFGNCNGLAVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADNFCMRGLSNFYPDLTK 720 
WD40-rpts      ________WD 8_____________)                                                      

Query      721 RIRTSYQSLTELNDSPVPLELERCKSPTSGLATRTPESALGFYRNEISAMRQRNQVYHLPENRENSYNRSRSSSISSIDK 800 
WD40-rpts                                                                                      

Query      801 DSKEAITALYFMDSFARKNDSTISPCLFVGTSLGMVLIISLNLPLADEQRFTEPVMVLPSGTFLSLKGAVLTFSCMDRMG 880 
WD40-rpts                                                                                      

Query      881 GLMQPPYEVWRDPNNIDENEKSWRRKVVMNSSSASQEIGDHQYTIICSEKQAKVFSLPSQTCLYVHNITETSFILQANVV 960 
WD40-rpts                                                                                      

Query      961 VMCSSACLACFCANGHIMIMRYLPSYKLSGNHNNTSKVQS 1000
WD40-rpts                                              

8 WD40-repeats found in QUERY=ENSP00000420287 (Len=1000):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    64-98       6.36  377.30  0.00051       25.0%     44.80
  WD 2:  Seg  5   101-139      7.31  416.82  0.00015       25.0%     56.54
  WD 3:  Seg  9   145-183      6.40  379.14  0.00048       20.0%     54.30
  WD 4:  Seg 14   197-237      7.78  435.90  8.3e-05       32.5%     49.68
  WD 5:  Seg 18   240-278      7.34  417.94  0.00014       15.0%     56.54
  WD 6:  Seg 32   432-477      5.91  358.72  0.00091       22.5%     35.80
  WD 7:  Seg 38   500-542      5.17  328.07  0.00236       10.0%     43.59
  WD 8:  Seg 44   634-666      2.85  232.42  0.04496       17.5%     39.14

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   64-98     T-----V---RH------GFPHQPTALAFDP-VQKILAIGTRTGAIRILG
   WD 2  101-139    -GVDCYC---QH------ESGAAVLQLQFLI-NEGALVSASSDDTLHLWN
   WD 3  145-183    -PAILHS---LK------FNRERITYCHLPF-QSKWLYVGTERGNTHIVN
   WD 4  197-237    NKAIELS---TK------THPGPVVHLSDSPRDEGKLLIGYENGTVVFWD
   WD 5  240-278    -SKRAEL---RV------YYDEAIHSIDWHH-EGKQFMCSHSDGSLTLWN
   WD 6  432-477    IGVKHKK---QGYSNKEWPISGGAWNLGAQT-YPEIIITGHADGSIKFWD
   WD 7  500-542    VGEGKQTCEIVE------EDPFAIQMIYWCP-ESRIFCVSGVSAYVIIYK
   WD 8  634-666    ------V---DG------EPPQQITSLAVSS-AYGIVAFGNCNG-LAVVD

   WD40 Template    TGECLRT---LS------GHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD