Input parameters:
Query = ENSP00000420260 (Len=55)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000420260, Len=55):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 YEGTALVTVGEDGQIKIWSKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTAVESS 55
WD40-rpts (______________WD 1______________)
1 WD40-repeats found in QUERY=ENSP00000420260 (Len=55):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 22-55 4.71 309.12 0.00424 20.0% 45.90
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 22-55 GMLRSTLAQQGTPVYSVAWGPDSEKVLYTAVESS-----
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD