Input parameters:
Query = ENSP00000419404 (Len=127)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000419404, Len=127):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKKFNFRKVLDGLTASSPGSGSSSGSNSGGGAGSGSVHPAGTAGVLREEIQETLTSEYFQICKTVRHGFPHQPTALAFDP 80
WD40-rpts (____________________WD 1___
Query 81 VQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFLINEGALV 127
WD40-rpts _________________)
1 WD40-repeats found in QUERY=ENSP00000419404 (Len=127):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 53-98 3.41 255.58 0.02216 27.5% 38.52
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 53-98 TLTSEYFQICKTVRHGFPHQPTALAFDPVQKILAIGTRTGAIRILG
WD40 Template TGE------CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD