Input parameters:
Query = ENSP00000419246 (Len=141)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000419246, Len=141):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLLLRCQLKQAPPQKTVVAYNWKTGNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWDLHGSSQPRQQLCGHAMV 80
WD40-rpts (_________________WD 1________________) (____________
Query 81 VTGLAVSPDSSQLCTGSRDNTLLLWDVVTGQSVERASVSRNVVTHLCWVPREPYILQTSED 141
WD40-rpts _____WD 2________________) (_____________WD 3_____________)
3 WD40-repeats found in QUERY=ENSP00000419246 (Len=141):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 25-63 9.87 522.53 5.6e-06 27.5% 55.14
WD 2: Seg 7 68-106 10.17 534.78 3.9e-06 37.5% 54.60
WD 3: Seg 10 110-141 4.50 300.51 0.00554 20.0% 42.11
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 25-63 GNVVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWD
WD 2 68-106 SQPRQQLCGHAMVVTGLAVSPDSSQLCTGSRDNTLLLWD
WD 3 110-141 GQSVERASVSRNVVTHLCWVPREPYILQTSED-------
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD