Input parameters:
Query = ENSP00000418911 (Len=173)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000418911, Len=173):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 CFPYARQDKKDKVGESRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCII 80
WD40-rpts (________________________________WD 1___________
Query 81 VSPDAGGAKRLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHN 160
WD40-rpts ____________________)
Query 161 GESVSYLFSHVPL 173
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000418911 (Len=173):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 33-101 3.65 265.47 0.01635 20.0% 22.91
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 33-101 GADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRLLSAGATKVYA
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVS-------------------GSEDGT----------IKVWD