Input parameters:
Query = ENSP00000418539 (Len=139)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000418539, Len=139):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XIDTEGKNAVMRLCFLKARKNTAVTGGANLVSCGGSGYVRFWDIYKKQLLAEFLAHSGVGSIIMSTDKMNRYLTTGDLDG 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2____________
Query 81 WLKIWNIEAKHWHIENCLFLPKRDTNLVESEIQKEISLFSKEESCLDPTEHSLLNKKNK 139
WD40-rpts _____)
2 WD40-repeats found in QUERY=ENSP00000418539 (Len=139):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-43 5.40 337.77 0.00175 20.0% 29.12
WD 2: Seg 4 47-86 7.87 439.79 7.4e-05 25.0% 58.12
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-43 TEGKNAVMRLCFL-KARKNTAVTGGANLVSCGGSGYVRFWD
WD 2 47-86 -KQLLAEFLAHSGVGSIIMSTDKMNRYLTTGDLDGWLKIWN
WD40 Template TGECLRTLSGHTS-GVTSVSFSPDGKRLVSGSEDGTIKVWD