Input parameters:
Query = ENSP00000418455 (Len=121)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000418455, Len=121):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRLKISLLKEPKHQELVSCVGWTTAEELYSCSDDHQIVKWNLLTSETTQIVKLPDDIYPIDFHWFPKSLGVKKQTQAESF 80
WD40-rpts (_________________WD 1________________) (__________________WD 2_____
Query 81 VLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTAL 121
WD40-rpts ____________)
2 WD40-repeats found in QUERY=ENSP00000418455 (Len=121):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-41 6.52 383.85 0.00042 25.0% 37.85
WD 2: Seg 6 53-93 4.15 286.29 0.00860 15.0% 17.49
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-41 LKISLLKEPKHQEL-VSCVGWTTAEE-LYSCSDDHQIVKWN
WD 2 53-93 LPDDIYPIDFHWFPKSLGVKKQTQAESFVLTSSDGKFHLIS
WD40 Template TGECLRTLSGHTSG-VTSVSFSPDGKRLVSGSEDGTIKVWD