Input parameters:
Query = ENSP00000417754 (Len=118)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000417754, Len=118):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 DLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATLYCINFSHDSSFL 80
WD40-rpts (__________________WD 1_________________) (__________________WD 2_____
Query 81 CASSDKGTVHIFALKDTRLNRRSAHLRRWDLPQICLHS 118
WD40-rpts ____________)
2 WD40-repeats found in QUERY=ENSP00000417754 (Len=118):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 9-49 8.15 451.40 5.1e-05 32.5% 53.14
WD 2: Seg 5 53-93 7.71 432.99 9.1e-05 27.5% 57.26
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 9-49 TSSAPFTINAHQ--SDIACVSLNQPGTVVASASQKGTLIRLFD
WD 2 53-93 -KEKLVELRRGTDPATLYCINFSHDSSFLCASSDKGT-VHIFA
WD40 Template TGECLRTLSGHT--SGVTSVSFSPDGKRLVSGSEDGT-IKVWD