Input parameters:
Query = ENSP00000416917 (Len=189)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000416917, Len=189):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XRAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDVRGFLIGDHSDMFNQKAELT 80
WD40-rpts (______________________________WD
Query 81 NQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQTIVEQVKEKTNHIQALAHSTVGQTLLIPLKKLFPSIISI 160
WD40-rpts 1______________________________)
Query 161 TWPLLFFEYEGNFIQRSGFSTLPRLFANS 189
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000416917 (Len=189):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 47-112 2.98 237.72 0.03827 15.0% 7.16
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 47-112 GVECIHTFGADFRDVRGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFT
WD40 Template TGECLRTLSGHTSGVTSVSFSP-------------DGKRLVSG-------------SEDGTIKVWD