Input parameters:
Query = ENSP00000416651 (Len=108)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000416651, Len=108):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLI 80
WD40-rpts (_________________WD 1______________
Query 81 IWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
WD40-rpts __)
1 WD40-repeats found in QUERY=ENSP00000416651 (Len=108):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 45-83 8.98 485.55 1.8e-05 35.0% 52.95
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 45-83 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWD
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD