Input parameters:
Query = ENSP00000416286 (Len=523)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000416286, Len=523):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MQKERELQETIYFKNTWPACMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKDNELIRVKQRKCEIALTTYETLRLCL 80
WD40-rpts
Query 81 DELNSLEWSAVIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVE 160
WD40-rpts
Query 161 HGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEP 240
WD40-rpts
Query 241 CTCRSGQKRRNCCYKTNSHGETVKTLYLSYLTVLQKVANHVALLQAASTSKQQETLIKRICDQVFSRFPDFVQKSKDAAF 320
WD40-rpts
Query 321 ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNI 400
WD40-rpts (_________________________WD 1__
Query 401 CLVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQIYKQQLHCVVVGS 480
WD40-rpts _______________________)
Query 481 ENAKRYFEAVQGSKEHQGELFGIHNLFKFRSQGSCLTKDILEV 523
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000416286 (Len=523):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 8 369-424 3.01 239.05 0.03675 25.0% 31.03
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 369-424 SGLDYRRLDGSTKSEERLKIVKEFNSTQDVNICLVSTMAGGLGLNFVGAN-VVVLFD
WD40 Template TGECLRTLSGHTS-----------------GVTSVSFSPDGKRLVSGSEDGTIKVWD