Input parameters:
Query = ENSP00000415437 (Len=105)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000415437, Len=105):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE 80
WD40-rpts (_______________________________________________WD 1____________________________
Query 81 TKMLMAAGDKDGDGKIGVDDPADVD 105
WD40-rpts ___________________)
1 WD40-repeats found in QUERY=ENSP00000415437 (Len=105):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-100 3.16 245.27 0.03040 30.0% -14.42
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-100 MTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDD
WD40 Template TGECLR---------------TLS--------GHTSGV----------------TSVS----------FSPDGKRLV-----------SGSEDGTIKVWD