Input parameters:
Query = ENSP00000415334 (Len=166)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000415334, Len=166):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTGRVDKNAPTVCGH 80
WD40-rpts (____
Query 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEGHTKRVGIVAWHTTAQNVLLSAGAAGGGAWGW 160
WD40-rpts ___________WD 1______________) (_________________WD 2________________)
Query 161 LVACSG 166
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000415334 (Len=166):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 76-110 5.77 353.15 0.00108 35.0% 47.78
WD 2: Seg 8 121-159 3.01 239.15 0.03664 22.5% 44.14
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 76-110 -----TVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWE
WD 2 121-159 REPVVTLEGHTKRVGIVAWHT-TAQNVLLSAGAAGGGAWG
WD40 Template GECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD