Input parameters:
Query = ENSP00000414422 (Len=260)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000414422, Len=260):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XSLKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTELAWLLPYNGVTVAQDNCY 80
WD40-rpts (__________________WD 1_________________)
Query 81 ASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTIAAGDISGELIAAILPDMALNPINVKRPVERRFVRIRTS 160
WD40-rpts (______________WD 2_____________)
Query 161 NSSCWILTHMPSQILPIYKADLIPYQDSPEGPDHSSASSGVPNPPKARTYTETVNHHYLLFQDTDLGSFHDLLRREPMLR 240
WD40-rpts
Query 241 MQEGEGHSQLCLDRLQLEAI 260
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000414422 (Len=260):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-44 5.85 356.12 0.00099 25.0% 44.91
WD 2: Seg 8 103-135 3.09 242.19 0.03340 15.0% 41.66
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-44 KLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWD
WD 2 103-135 -------TAPRKGTVWSLSGSD-WLGTIAAGDISGELIAAI
WD40 Template TGECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD