Input parameters:
Query = ENSP00000414226 (Len=89)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000414226, Len=89):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MVEEENIRVVRCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNNHLQVPLHALRI 80
WD40-rpts (_________________WD 1________________) (___________________WD 2__________
Query 81 SKRAVFLFP 89
WD40-rpts ________)
2 WD40-repeats found in QUERY=ENSP00000414226 (Len=89):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-43 6.90 399.55 0.00026 22.5% 50.93
WD 2: Seg 5 47-89 7.54 425.92 0.00011 22.5% 37.07
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-43 ENIRVVRCGGSELNFRRAVFSADSKYIFCV----SGD-FVKVYS
WD 2 47-89 -EECVHILHGHRNLVTGIQLNPNNHLQVPLHALRISKRAVFLFP
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSG----SEDGTIKVWD