Input parameters:
Query = ENSP00000414201 (Len=110)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000414201, Len=110):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLHQRERGLCHRGSFSLGEQSRVISHFLPNDLGFTDSYSQKAFCGIYSKDGQIFMSACQDQTIRLYDCRYGRFRKFKSIK 80
WD40-rpts (_________________WD 1________________)
Query 81 ARDVGWSQGGPESSSSTVAAPLAKWLCTTF 110
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000414201 (Len=110):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 29-67 3.55 261.28 0.01860 22.5% 42.78
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 29-67 PNDLGFTDSYSQKAFCGIYSKDGQIFMSACQDQTIRLYD
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD