Input parameters:

  Query = ENSP00000413979 (Len=411)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000413979, Len=411):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGLSFSSGQKANGFPPDKSSGSKKQKQYQRIRKEKPQQHNFTHRLLAAALKSHSGNISCMDFSSNGKYLATCADDRTIRI 80  
WD40-rpts      (______________WD 1_____________)             (_______________WD 2______________

Query       81 WSTKDFLQREHRSMRANVELDHATLVRFSPDCRAFIVWLANGDTLRVFKMTKREDGGYTFTATPEDFPKKHKAPVIDIGI 160 
WD40-rpts      _)(_____________________WD 3____________________)           (_________________WD

Query      161 ANTGKFIMTASSDTTVLIWSLKGQVLSTINTNQMNNTHAAVSPCGRFVASCGFTPDVKVWEVCFGKKGEFQEVVRAFELK 240 
WD40-rpts       4_________________)  (_________________WD 5________________)           (_______

Query      241 GHSAAVHSFAFSNDSRRMASVSKDGTWKLWDTDVEYKKKQDPYLLKTGRFEEAAGAAPCRLALSPNAQVLALASGSSIHL 320 
WD40-rpts      __________WD 6________________)             (________________WD 7_______________

Query      321 YNTRRGEKEECFERVHGECIANLSFDITGRFLASCGDRAVRLFHNTPGHRAMVEEMQGHLKRASNESTRQRLQQQLTQAQ 400 
WD40-rpts      _)   (_________________WD 8________________)     (_________________WD 9_________

Query      401 ETLKSLGALKK 411 
WD40-rpts      _______)   

9 WD40-repeats found in QUERY=ENSP00000413979 (Len=411):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-33       4.33  293.55  0.00687       15.0%     28.96
  WD 2:  Seg  3    47-82       9.03  487.57  1.7e-05       27.5%     46.17
  WD 3:  Seg  6    83-129      6.69  391.15  0.00033       27.5%     49.85
  WD 4:  Seg 11   141-180     10.65  554.60  2.1e-06       22.5%     43.76
  WD 5:  Seg 14   183-221      9.28  498.19  1.2e-05       27.5%     54.14
  WD 6:  Seg 18   233-271      9.28  498.20  1.2e-05       42.5%     52.74
  WD 7:  Seg 22   285-322      6.39  378.47  0.00049       15.0%     43.86
  WD 8:  Seg 25   326-364      6.26  373.07  0.00058       22.5%     51.75
  WD 9:  Seg 28   370-408      7.07  406.65  0.00021        7.5%     46.87

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-33     MG------------LS-FSSGQKANGFPPDKS-SGSKKQ-KQYQRIRK
   WD 2   47-82     ----AA------ALKS-HSGNISCMDFSSNGK-YLATCADDRTIRIWS
   WD 3   83-129    TKDFLQREHRSMRANV-ELDHATLVRFSPDCRAFIVWLANGDTLRVFK
   WD 4  141-180    TATPED------FPKK-HKAPVIDIGIANTGK-FIMTASSDTTVLIWS
   WD 5  183-221    -GQVLS------TINT-NQMNNTHAAVSPCGR-FVASCGFTPDVKVWE
   WD 6  233-271    -VVRAF------ELKG-HSAAVHSFAFSNDSR-RMASVSKDGTWKLWD
   WD 7  285-322    -LKTGR------FEEA-AGAAPCRLALSPNAQ-VLALAS-GSSIHLYN
   WD 8  326-364    -GEKEE------CFERVHGECIANLSFDITGR-FLASCG-DRAVRLFH
   WD 9  370-408    -RAMVE------EMQG-HLKRASNESTRQRLQ-QQLTQAQETLKSLGA

   WD40 Template    TGECLR------TLSG-HTSGVTSVSFSPDGK-RLVSGSEDGTIKVWD