Input parameters:
Query = ENSP00000413067 (Len=83)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000413067, Len=83):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT 80
WD40-rpts (_______________WD 1_______________) (_________________WD 2________________)
Query 81 LKG 83
WD40-rpts
2 WD40-repeats found in QUERY=ENSP00000413067 (Len=83):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-36 6.08 366.00 0.00073 5.0% 38.65
WD 2: Seg 4 42-80 8.59 469.45 2.9e-05 25.0% 50.84
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-36 ---MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYE
WD 2 42-80 WTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD