Input parameters:

  Query = ENSP00000412458 (Len=568)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000412458, Len=568):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFPQSRHPTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80  
WD40-rpts                                                                                      

Query       81 IAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGSNSLLVPDSLRGTDKRRNGPEFSNDIKKRKVDDKDS 160 
WD40-rpts                                                                                      

Query      161 SHYDSDGDKSDDNLVVDVSNEDPSSPRASPAHSPRENGIDKNRLLKKDASSSPASTASSASSTSLKSKEMSLHEKASTPV 240 
WD40-rpts                                                                                      

Query      241 LKSSTPTPRSDMPTPGTSATPGLRPGLGKPPAIDPLVNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYASL 320 
WD40-rpts                                                                                   (__

Query      321 HNMSPQMSAAAAAAAVVAYGRSPMVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 400 
WD40-rpts      _______________WD 1________________)     (_________________WD 2________________)

Query      401 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVE 480 
WD40-rpts         (_________________WD 3________________)(__________________WD 4_______________

Query      481 VLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKK 560 
WD40-rpts      __)(__________________WD 5_________________)(__________________WD 6_____________

Query      561 ATVYEVIY 568 
WD40-rpts      ____)   

6 WD40-repeats found in QUERY=ENSP00000412458 (Len=568):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   318-356      7.43  421.70  0.00013       15.0%     44.64
  WD 2:  Seg  4   362-400      9.08  489.80  1.6e-05       30.0%     55.78
  WD 3:  Seg  8   404-442     10.11  532.16  4.2e-06       35.0%     55.07
  WD 4:  Seg 12   443-483      7.72  433.37  9.0e-05       25.0%     50.77
  WD 5:  Seg 16   484-524      8.59  469.44  2.9e-05       30.0%     53.57
  WD 6:  Seg 20   525-565      7.92  441.92  6.9e-05       32.5%     55.87

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  318-356    -AS-LHNMSP-QMSAAAAAAAVVAYGRSPMVGGEASTLSIWD
   WD 2  362-400    -PR-IKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWD
   WD 3  404-442    -QT-LVRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWD
   WD 4  443-483    LRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
   WD 5  484-524    VNKPDKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
   WD 6  525-565    TPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE

   WD40 Template    TGE-CLRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD