Input parameters:
Query = ENSP00000412348 (Len=212)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000412348, Len=212):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGTDLMTSVPVKERVKVSQNWRLGRCREGILLKWRCRQMPWM 80
WD40-rpts (________________
Query 81 QLEDDSLYISQANFILAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKYSAHEQE 160
WD40-rpts _WD 1________________) (________________WD 2_______________) (____________
Query 161 VNCVDCKGGIIVSGSRDRTAKVWPLASGRLGQCLHTIQTEDRVWSIAISPLL 212
WD40-rpts ____WD 3_______________)
3 WD40-repeats found in QUERY=ENSP00000412348 (Len=212):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 64-102 4.98 320.31 0.00300 5.0% 33.46
WD 2: Seg 6 109-145 6.63 388.71 0.00036 25.0% 47.28
WD 3: Seg 10 148-184 7.05 406.05 0.00021 35.0% 45.79
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 64-102 CREGILLKWRCRQMPWMQLEDDSLYISQANFILAYQFRP
WD 2 109-145 RRPLGVFAGHDEDVCH--FVLANSHIVSAGGDGKIGIHK
WD 3 148-184 STFTVKYSAHEQEVNCV--DCKGGIIVSGSRDRTAKVWP
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD