Input parameters:
Query = ENSP00000412164 (Len=213)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000412164, Len=213):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT 80
WD40-rpts (_______________WD 1_______________)(___________________WD 2___________________)
Query 81 LKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAG 160
WD40-rpts (_________________WD 3________________) (___________________WD 4__________
Query 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWPLKHYHCWR 213
WD40-rpts _________)
4 WD40-repeats found in QUERY=ENSP00000412164 (Len=213):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-36 6.85 397.53 0.00027 5.0% 41.17
WD 2: Seg 4 37-80 9.03 487.55 1.7e-05 25.0% 54.06
WD 3: Seg 8 86-124 7.73 434.04 8.8e-05 12.5% 54.74
WD 4: Seg 12 127-170 8.87 481.13 2.0e-05 22.5% 53.01
Multiple sequence alignment of 4 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-36 ------------MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYE
WD 2 37-80 KSGAKWT----KVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVWT
WD 3 86-124 -W----K----PTLVILRINRAARCVRWAPNENKFAVGSGSRVISICY
WD 4 127-170 QE----NDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFS
WD40 Template TG----E----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD