Input parameters:
Query = ENSP00000411919 (Len=177)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000411919, Len=177):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAEAEEQEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLD 80
WD40-rpts (_______________WD 1_______________) (_________________WD
Query 81 ESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGN 160
WD40-rpts 2________________)(____________________WD 3___________________)
Query 161 IRSVKWRGHLIAWANNM 177
WD40-rpts
3 WD40-repeats found in QUERY=ENSP00000411919 (Len=177):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 23-58 4.23 289.50 0.00779 15.0% 43.97
WD 2: Seg 5 61-99 8.35 459.42 4.0e-05 20.0% 53.14
WD 3: Seg 9 100-144 5.57 344.62 0.00141 10.0% 39.57
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 23-58 SNGVTEIL--QKDAASCMTVHD-------KFLALGTHYGKVYLLD
WD 2 61-99 -GNITQKFDVSPVKINQISLDES-----GEHMGVCSEDGKVQVFG
WD 3 100-144 LYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERS
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-----GKRLVSGSEDGTIKVWD