Input parameters:
Query = ENSP00000411109 (Len=221)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000411109, Len=221):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRLRFWLLIWLLLGFISHQPTPVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKD 80
WD40-rpts (_________________________________________________________________WD 1__________
Query 81 VITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFL 160
WD40-rpts _______________________________________________________)
Query 161 AFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGPLI 221
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000411109 (Len=221):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-136 2.81 230.93 0.04703 20.0% 5.86
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-136 MRLRFWLLIWLLLGFISHQPTPVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED
WD40 Template TG--------------ECLRT-----------LSGHTSG-----------------V--------TSVSFSPDGKRL-----------------------VSGSEDGTIKVWD-----------------------