Input parameters:

  Query = ENSP00000410899 (Len=1269)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000410899, Len=1269):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYIT 80  
WD40-rpts                                                (_________________WD 1________________

Query       81 EVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEI 160 
WD40-rpts      )   (_________________WD 2_________________)  (________________WD 3_____________

Query      161 HFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL 240 
WD40-rpts      ___)(___________________WD 4___________________)                                

Query      241 HNFLHMLSSRSSGIQVGEQSTVQDSATPSPPPPPPQPSTERPRTSAYIRLRQRVSYPTAECCQHLGILCLCSRCSGTRVP 320 
WD40-rpts                (__________________WD 5__________________)                            

Query      321 SLLPHQDSVPPASARATTPSFSFVQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLS 400 
WD40-rpts                                                                                      

Query      401 SHPSRYHREIAPGLTGSEWTRTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATE 480 
WD40-rpts                                                          (_____________________WD 6__

Query      481 SDGGNGSSQNNSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNL 560 
WD40-rpts      __________________)                                                             

Query      561 SRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSWQVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASP 640 
WD40-rpts                                                                                      

Query      641 QEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRLSPAAYYAQRMIQYLSRRDSIRQRSMRYQ 720 
WD40-rpts                                                                                      

Query      721 QNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGL 800 
WD40-rpts                                                                                      

Query      801 ATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCDISADGQLLAAFIP 880 
WD40-rpts                                                                                      

Query      881 SSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPSTEHMVAQVFRLQQAHGGET 960 
WD40-rpts                                                                                      

Query      961 SMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPEALNSGVEYYWDQLNETVFTVHSNSRSSERP 1040
WD40-rpts                                                                                      

Query     1041 GTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQTEREVPEPGTAASGPGEGEGSEYGASGEDALS 1120
WD40-rpts                                                                                      

Query     1121 RIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTEPGAAHTSSPQPSTSRGLLPEAGQLAERGLSPR 1200
WD40-rpts                                                                                      

Query     1201 TASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTLHCELTNNNHLLDGGSSRGDAAGPRGEPRNR 1269
WD40-rpts                                                                           

6 WD40-repeats found in QUERY=ENSP00000410899 (Len=1269):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    43-81       7.02  404.68  0.00022       22.5%     51.15
  WD 2:  Seg  9    85-124      7.89  440.47  7.2e-05       35.0%     53.65
  WD 3:  Seg 13   127-164      5.71  350.71  0.00117       20.0%     49.69
  WD 4:  Seg 17   165-208      5.02  322.21  0.00283       17.5%     53.12
  WD 5:  Seg 24   251-292      4.47  299.44  0.00573       10.0%     18.57
  WD 6:  Seg 32   453-499      2.80  230.18  0.04812       17.5%     -1.96

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   43-81     EG--K-------RV-ELPDSPRSTFLLAFSPD-RTLLASTHVNHNIYITE
   WD 2   85-124    -G--K-------CVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD
   WD 3  127-164    -G--G-------SESWFTDSNNAIASLAFHPT-AQLLLIATAN-EIHFWD
   WD 4  165-208    WS--R---REPFAVVKTASEMERVRLVRFDPL-GHYLLTAIVNPSNQQGD
   WD 5  251-292    SSGIQ-------VGEQSTVQDSATPSPPPPPP-QPSTERPRTSAYIRLRQ
   WD 6  453-499    QQ--EGGSQASVYTSATEGRGFPASGLATESD-GGNGSSQNNSGSIRHEL

   WD40 Template    TG--E-------CLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD