Input parameters:
Query = ENSP00000408344 (Len=134)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000408344, Len=134):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF 80
WD40-rpts (_________________WD 1_________________)(_________
Query 81 NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 134
WD40-rpts __________WD 2___________________)
2 WD40-repeats found in QUERY=ENSP00000408344 (Len=134):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 31-70 7.62 429.39 0.00010 32.5% 37.64
WD 2: Seg 7 71-114 6.02 363.38 0.00079 17.5% 48.59
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 31-70 -SIG-RDHPDVHRYSVETVQWYPHDTGM---FTSSSFDKTLKVWD
WD 2 71-114 TNTLQTADVFNFEETVYSHHMSP-VSTKHCLVAVGTRGPKVQLCD
WD40 Template TGEC-LRTLSGHTSGVTSVSFSP-DGKR---LVSGSEDGTIKVWD