Input parameters:
Query = ENSP00000408129 (Len=142)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000408129, Len=142):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XCGTAFDFHKEIDYMFLVGTEEGKIYKCSKSYSSQFLDTYDAHNMSVDTVSWNPYHTKVFMSCSSDWTVKIWDHTIKTPM 80
WD40-rpts (_________________WD 1_________________)(______
Query 81 FIYDLNSAVGDVAWAPYSSTVFAAVTTDGKEKKGQEVQKGPAVEIAKLDKLLNLVREVKIKT 142
WD40-rpts ____________WD 2__________________)
2 WD40-repeats found in QUERY=ENSP00000408129 (Len=142):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 34-73 6.05 364.68 0.00076 37.5% 51.83
WD 2: Seg 8 74-115 3.64 264.86 0.01666 17.5% 55.88
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 34-73 -S-QFLDTYDAHNMSVDTVSWNPYHTKVFMSCSSDWTVKIWD
WD 2 74-115 HTIKTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTDGKEKKGQ
WD40 Template TG-ECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD