Input parameters:
Query = ENSP00000408062 (Len=153)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000408062, Len=153):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATF 80
WD40-rpts (________________WD 1________
Query 81 HQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAH 153
WD40-rpts ________)(_____________________WD 2____________________)
2 WD40-repeats found in QUERY=ENSP00000408062 (Len=153):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 52-89 3.92 276.42 0.01167 20.0% 46.02
WD 2: Seg 7 90-136 6.02 363.44 0.00079 27.5% 47.43
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 52-89 -KDPVSIEERARWTETYVRWSPKGTYLATFH--------QRGIALWG
WD 2 90-136 GEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWD
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGS-------EDGTIKVWD